RiceGAAS: Rice Genome Annotation Database


Browse the annotation results with RiceGAAS and GenBank CDS features for the rice genome entries in GenBank database. Link from the PAC/BAC clone table sorted by chromosome and clone name and the keyword search to annotaion figures are available. Homology searches are re-executed with the latest entries in reference databases.



Links to Genome Annotation

  • Available data list

  • PAC/BAC clones list : Please select a rice chromosome number and push the button.

    Chromosome No. :

  • Annotation figure of a clone : Please input rice PAC/BAC clone name and push the button.

    PAC/BAC clone name :

  • Comparison table of gene prediction : comparison of predicted coding regions with this system to GenBank CDS features.



    Keyword Search (homology and motif search results)

    Please input Key Word (Search String), and push the "Search!" button.
    (ex. amylase, kinase ...)

    Search String: [How to search]

    Display: Sort:




    Keyword Search (GFSelecter prediction)

    Please input Key Word (Search String), and push the "Search!" button.
    (ex. amylase, kinase ...)

    Search String: [How to search]

    Target index: GFS AutoPredgene  ·  Gene function assigned by GFSelector
    for the predicted genes by RiceGAAS.
    GFS Predgene  ·  Gene function assigned by GFSelector
    for the predicted genes in GenBank entries.
    GenBank CDS feature  ·  Gene function described in GenBank CDS features.

    Display: Sort:



    Revision History:

    Web-Page and Server Function Updates:
    Sep 16, 2008