Tutorial for rice genome database

1. Analyze a sequence using RiceGAAS.
(1) Access the RiceGAAS user page.
(2) At your first visit, ...
(3) Login the system.
(4) Submit your query sequence.
(5) Open your data list.
(6) Open an annotation map.
(7) Open a predicted gene page.
(8) To see PLACE(SignalScan) results, ...

2. Search analysis result files stored in RiceGAAS related to a keyword.
(1) Use a keyword search function at ...
(2) Input keyword ...
(3) For example, if you designate "kinase" and BLASTP" ...

3. Search files using SRS, for example entries in GENBANK related to "kinase" and "Oryza".
(1) Access SRS at ...
(2) Push "Start".
(3) Input "kinase Oryza" ...

4. Analyze a sequence using RiceBLAST.
(To locate a sequence on the rice genetic map in silico, please see here.)
(1) Prepare a sequence.
(2) Access the RiceBLAST at...
(3) To investigate ...
(4) Set analysis conditions.
(5) Push the "Search" button. ...
(6) To see the result page, ...
(7) You can jump to the INE database from the results.
(8) Access the INE database through ...
(9) Input ...
(10) A position on the integrated map ...