RiceCpGViewer:
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RiceCpGViewer: |
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| This RiceCpGViewer shows the distribution of CpG dinucleotides together with the positions of exons of each predicted gene along rice chromosomes, which enables to obtain information about the association of rice CpG clusters (or CpG islands) to genes. The graphs display the moving average values for the G+C content (top), the ratio of observed to expected CpG (middle), and CpG frequency (bottom). In the analysis, we used a 100 bp window (N=100), moving across the sequences at 10 bp intervals. |
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